Group

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Current Members:

This section is under construction and not complete!

Who What When Link(s)
Aurelia (Lia) Ball NIH Postdoctoral Fellow 2013- Personal Web Page
Boxue Tian Postdoctoral Researcher 2012- UCSF Profiles
Google Scholar
CV
John Bruning Pharmaceutical Sciences and Pharmacogenomics Graduate Program 2011-
Diego Garrido Ruiz Graduate Group in Biophysics, UC-Mexus Graduate Fellow 2012-
Chakrapani Kalyanaraman Associate Research Chemist 2003- UCSF Profiles
Song Ling Computer Systems Administrator 2003-2006, 2015-
Ryan Pemberton Postdoctoral Researcher 2015- Personal Web Page
LinkedIn
ResearchGate
Olivia Pierce Postdoctoral Researcher 2015- LinkedIn

Former Members:

Who What When Where Link
Sergio Wong Graduate Group in Biophysics 2002-2006 Scientist, Lawrence Livermore National Lab Lab
Katarzyna Bernacki NSF Postdoctoral Fellow 2002-2006
Ilya Chorny Sloan Postdoctoral Fellow 2003-2005 Scientist, Illumina LinkedIn
Niu Huang Postdoctoral Researcher 2003-2006 Associate Investigator, National Institute of Biological Sciences (Beijing) Huang Lab
Ben Sellers Graduate Group in Biophysics 2003-2008 Computational chemist, Genentech LinkedIn
Jerome Nilmeier Graduate Group in Biophysics 2003-2008 Data Scientist, IBM LinkedIn
GoogleScholar
Eli Groban Graduate Group in Biophysics 2003-2008 Director, Metabolic Engineering and Systems Biology at Intrexon Corporation LinkedIn
Nima Fayazmanesh MSTP/Graduate Group in Biophysics 2004-2008 Chief Resident, Psychiatry LinkedIn
Arjun Narayanan Graduate Group in Biophysics 2004-2009 Scientist, Pfizer LinkedIn
Gabriela Barreiro Postdoctoral Researcher 2005-2006 LinkedIn
ResearchGate
Colin Smith Graduate Group in Bioinformatics 2005-2011 Postdoc, Max Plank Institute LinkedIn
Laura Dominguez Visiting student, Specialist 2006-2007 Professor, UNAM LinkedIn
UNAM
Chris McClendon Graduate Group in Biophysics 2005-2011 Scientist, Pfizer LinkedIn
GoogleScholar
Francesca Milletti Visiting Student (Universita degli Studi di Perugia) 2008 Principal Scientist, Roche LinkedIn
GoogleScholar
Lan Hua Postdoctoral Researcher 2008-2012 LinkedIn
Salma Rafi Postdoctoral Researcher 2008-2013 Schrodinger LinkedIn
Monica Tremont Hsu Graduate Group in Biophysics 2008-2013 Data Scientist, Intuit LinkedIn
Elena Dolghih Postdoctoral Researcher 2009-2013 Scientist, Eli Lilly LinkedIn
ResearchGate
Adam Steeves Postdoctoral Researcher 2009-2013 Assistant Professor, Ithaca College Lab
Siegfried Leung Postdoctoral Researcher 2009-2014 Scientist, Circle Pharma LinkedIn
ResearchGate
Michael Chimenti Postdoctoral Researcher 2009-2015 LinkedIn
Personal
Frank Wallrapp Postdoctoral Researcher 2010-2012 Scientist, Clariant LinkedIn
Suwen Zhao Postdoctoral Researcher 2010-2015 Assistant Professor, Shanghai Tech (iHuman) Lab
Morena Spreafico Postdoctoral Researcher 2011-2013 Research Associate, MBR Optical Systems LinkedIn
Lili Peng Postdoctoral Researcher 2011-2013 Scientist, AstraZeneca LinkedIn
Katrina Lexa Postdoctoral Researcher 2011-2015 Scientist, Merck LinkedIn
ResearchGate
Qin Wang Postdoctoral Researcher 2012-2014 LinkedIn

Members of my lab have won a number of prestigious awards:

Katarzyna Bernacki 2003 NSF Postdoctoral Fellowship in Interdisciplinary Informatics
Ilya Chorny 2003 Sloan/DOE Postdoctoral Fellowship in Computational Molecular Biology/Bioinformatics
Sergio Wong 2003 UCSF Program in Quantitative Biology Burroughs Wellcome Fellowship
Eli Groban 2004 UCSF Program in Quantitative Biology Burroughs Wellcome Fellowship
Ben Sellers 2004 Genentech Fellowship
Sergio Wong 2005 UCSF President’s Dissertation Year Fellowship
Nima Fayazmanesh 2006 National Defense Science and Engineering Graduate Fellowship
Colin Smith 2007 Genentech Scholar
Colin Smith 2007 Department of Energy Computational Science Graduate Fellowship
Sergio Wong 2007 Frank Goyan Award (given for a superior thesis in physical chemistry at UCSF)
Eli Groban 2008 Frank Goyan Award (given for a superior thesis in physical chemistry at UCSF)
Monica Tremont 2008 Chancellor’s Fellowship
Chris McClendon 2008 CRCC Fellowship
Monica Tremont 2009 NSF Graduate Fellowship
Adam Steeves 2010 NIH Postdoctoral Fellowship
Katrina Lexa 2011 NIH Postdoctoral Fellowship
Chris McClendon 2011 Frank Goyan Award (given for a superior thesis in physical chemistry at UCSF)
Morena Spreafico 2011 SNF Fellowship
Chris McClendon 2012 NIH Postdoctoral Fellowship (UCSD)
Laura Dominguez 2012 Schlumberger Foundation Faculty for the Future Fellowship (Boston U.)
Linsey Brier (summer student) 2013 Goldwater Scholarship
Paulomi Bhattacharya 2013 Intel Science Talent Search National Finalist (Also finalist for the Siemens competition)
Aurelia (Lia) Ball 2015 NIH Postdoctoral Fellowship

Former rotation students:  Paul Thomas (Biophysics, 2015), Adolfo Cuesta (CCB/MSTP, 2014), Sam Ivry (PSPG, 2013), Sara Calhoun (Biophysics, 2013), Kale Kundert (Biophysics, 2011), Catherine Shi (Biophysics, 2011), Geoff Rollins (Biophysics, 2009), Andrew Wiser (CCB, 2009), Henry Lin (Bioinformatics, 2008), Kris Kuchenbecker (Biophysics, 2007), Rebeca Choy (Biophysics, 2006), Jeremy Philips (BMI, 2006), Stephen Floor (Biophysics, 2006), Hesper Rego (Biophysics, 2006), Dan Mandell (BMI, 2005), David Lomelin (BMI, 2004), Brian Tuch (BMI, 2003), Chris Farady (Biophysics, 2002).

Former undergraduate summer students:  Bryce Bagley (2015, Whitworth U.), Javier How (2014, Florida International U.), Qidi Chen (2014, UC Berkeley), Paulomi Bhattacharya (2013, high school student), Linsey Brier (2013, undergraduate student, SRTP), Amy Ye (2008 Amgen Scholar, U. Illinois Chicago), Dinah Zaghi and Reina Eisner (2005 and 2006, respectively; both from Stern College, Yeshiva University).

Former student visitors: Daisuke Kuroda (2010; Osaka U.), Jona Mijalkovic (2009-2010; Leiden U.), Alrun Koller (2009; U. Dusseldorf, group of Holger Gohlke), Hod Greeley (2003-2004; visiting graduate student, Columbia University).

Former sabbatical visitors: Meijuan Fang (2014; Xiamen University), John Jelesko (2013; Virginia Polytechnic), Pradipta Bandyopadhyay (2008; Jawaharlal Nehru University, New Delhi, India), Evangelos “Vageli” Coutsias (summer 2008; U. New Mexico), Chris Oostenbrink (summer 2006; currently at U. Natural Resources and Life Sciences, Vienna).

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