K. A. Ball, J. R. Johnson, M. K. Lewinski, J. Guatelli, E. Verschueren, N. J. Krogan, and M. P. Jacobson. “Non-degradative Ubiquitination of Protein Kinases”, PLoS Computational Biology, 12 (2016) e1004898. PMC4890936
Category Archives: Allostery
108.
D. Datta, C. L. McClendon, M. P. Jacobson, and J. A. Wells. “Substrate and inhibitor-induced dimerization and cooperativity in caspase-1 but not caspase-3”, Journal of Biological Chemistry, 288 (2013) 9971-9981. PMC3617296
97.
C. L. McClendon, L. Hua, G. Barreiro, and M. P. Jacobson. “Comparing Conformational Ensembles Using the Kullback-Leibler Divergence Expansion”, Journal of Chemical Theory and Computation, 8 (2012) 2115-2126. Online Simtk PMC3538811
82.
J. D. Sadowsky, M. A. Burlingame, D. W. Wolan, C. L. McClendon, M. P. Jacobson and J. A. Wells. “Turning a protein kinase (PDK1) on or off from a single allosteric site via disulfide trapping”. PNAS, 108 (2011) 6056-6061. PMC21430264
80.
F. Morcos, S. Chatterjee, C. L. McClendon, P. R. Brenner, R. Lopez-Rendon, J. Zintsmaster, M. Ercsey-Ravasz, C. R. Sweet, M. P. Jacobson, J. W. Peng, and J. A. Izaguirre. “Modeling the conformational ensembles of NMR relaxation dispersion: molecular dynamics study of slow functional motions in the Pin1-WW domain”. PLoS Computational Biology, 6 (2010) e1001015. PMC2996313
79.
T. Shimazu, M. D. Hirschey, L. Hua, B. Schwer, D. B. Lombard, Y. Li, J. Bunkenborg, F. W. Alt, M. P. Jacobson, and E. Verdin. “SIRT3 Deacetylates Mitochondrial 3-Hydroxy-3-Methylglutaryl CoA Synthase 2, Increases its Enzymatic Activity and Regulates Ketone Body Production”. Cell Metabolism, 12 (2010) 654-661. Online PMC3310379
72.
C. L. McClendon, G. Friedland, D. L. Mobley, H. Amirkhani, and M. P. Jacobson. “Quantifying Correlations Between Allosteric Sites in Thermodynamic Ensembles”, Journal of Chemical Theory and Computation, 5 (2009) 2486-2502. PMC2790287